Find Protein-Protein Interactions (PPI) Network

Choose & Enter
Choose animal: Visualization driver:
Protein/NCBI_ID(s):
Refseq_ID(s):
KEGG_KO(s):


Level of PPIs:
or Upload text file: 		Update repository

Visible interactions: Visible interactors: Size of node:

Visualization interactions

Powered by Cytoscape.js taxid = 1026970 for: protein(s) Zscan2 (from a repository: Fri May 11 03:22:43 2018)
Examples

Layout Breadthfirst

Circle

Concentric

Cose

Grid

Random
Export graph PNG file
JPG file
JSON file

Statistics and Network structure information

Statistics of PPI Value(s)
The number of interactors (fusion and proteins)2
The number (and %) of the onco-proteins0 (0.00 %)
The number (and %) of the tumor suppressors0 (0.00 %)
Total number of binary PPIs (saturation %)1 (100.00 %)
The number (and %) of affected PPIs1 (100.00 %)
PPI diameter1
PPI radius1
The average degree of PPI1.000
Assortativity coefficient0
The network average Clustering coefficient0.000
The number (and %) of a zero Clustering coefficients2 (100.00 %)
The number (and %) of a zero Betweenness Centrality2 (100.00 %)

ACTIVE INTERACTORS


List of active interactors

Interactor,
Domain structure		 Type Number
of PPI (degree)		 Clustering
Coefficient		 Betweenness
Centrality		 Domains (Pfam ID): description
Zscan2

Domain structure obtained by HMM

Protein ID: XP_008850990.1 - zinc finger and SCAN domain-containing protein 2
KEEG Ortholog ID: K09230
DomainsPfam IDlengthE-valueScorealifromalitoenvfromenvtoDescription
SCANPF02023901.3e-2369.0006813256134SCAN domain
zf-H2C2_2PF13465260.00000002120.800218232215233Zinc-finger double domain
zf-C2H2PF00096230.00000000006528.700222244222244Zinc finger, C2H2 type
zf-H2C2_2PF13465260.0000000002526.900237260236261Zinc-finger double domain
zf-H2C2_2PF13465260.000000000007631.700264288264289Zinc-finger double domain
zf-H2C2_2PF13465260.000000000003132.900292316292317Zinc-finger double domain
zf-H2C2_2PF13465260.0000000000002336.500320345320345Zinc-finger double domain
zf-H2C2_2PF13465260.000000000009731.300348373348373Zinc-finger double domain
zf-H2C2_2PF13465260.000000000002833.000376400376401Zinc-finger double domain
zf-H2C2_2PF13465260.0000000000004235.600405428404429Zinc-finger double domain
zf-C2H2PF00096230.000000000009931.200418440418440Zinc finger, C2H2 type
zf-H2C2_2PF13465260.00000000001430.900432456432457Zinc-finger double domain
zf-C2H2PF00096230.0000000007725.300446468446468Zinc finger, C2H2 type
zf-H2C2_2PF13465260.000000001624.300461484460484Zinc-finger double domain
zf-H2C2_2PF13465260.000000000001633.800488512488513Zinc-finger double domain
zf-H2C2_2PF13465260.00000000002630.000517540516541Zinc-finger double domain
zf-H2C2_2PF13465260.000000001424.500545568545568Zinc-finger double domain
zf-H2C2_2PF13465260.0000000000009934.500576597573597Zinc-finger double domain
zf-C2H2PF00096230.00000000003929.400586608586608Zinc finger, C2H2 type
zf-H2C2_2PF13465260.00683.400603614600614Zinc-finger double domain
user protein100SCAN (PF02023): SCAN domain
zf-H2C2_2 (PF13465): Zinc-finger double domain
zf-C2H2 (PF00096): Zinc finger, C2H2 type
LOC103751938

Domain structure obtained by HMM

Protein ID: XP_017650467.1 - histone deacetylase 8 isoform X1
DomainsPfam IDlengthE-valueScorealifromalitoenvfromenvtoDescription
DNase-RNasePF025771290.000008211.70010946107Bifunctional nuclease
Hist_deacetylPF008503061.2e-83267.1003432031322Histone deacetylase domain
CITEDPF044872098e-34103.600484604417607CITED
interactor100DNase-RNase (PF02577): Bifunctional nuclease
Hist_deacetyl (PF00850): Histone deacetylase domain
CITED (PF04487): CITED

B a c k    t o    T o p ⇑