Find Protein-Protein Interactions (PPI) Network

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Visualization interactions

Powered by Cytoscape.js taxid = 1026970 for: protein(s) Adamtsl5 (from a repository: Fri Apr 20 23:33:25 2018)
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Statistics and Network structure information

Statistics of PPI Value(s)
The number of interactors (fusion and proteins)3
The number (and %) of the onco-proteins1 (33.33 %)
The number (and %) of the tumor suppressors0 (0.00 %)
Total number of binary PPIs (saturation %)3 (100.00 %)
The number (and %) of affected PPIs2 (66.67 %)
PPI diameter2
PPI radius1
The average degree of PPI1.333
Assortativity coefficient0
The network average Clustering coefficient0.000
The number (and %) of a zero Clustering coefficients3 (100.00 %)
The number (and %) of a zero Betweenness Centrality2 (66.67 %)

ACTIVE INTERACTORS


List of active interactors

Interactor,
Domain structure		 Type Number
of PPI (degree)		 Clustering
Coefficient		 Betweenness
Centrality		 Domains (Pfam ID): description
Adamtsl5

Domain structure obtained by HMM

Protein ID: XP_008835370.1 - ADAMTS-like protein 5
DomainsPfam IDlengthE-valueScorealifromalitoenvfromenvtoDescription
TSP_1PF00090490.0000000000007634.80047934693Thrombospondin type 1 domain
ADAM_spacer1PF059861142.5e-2987.900201307199307ADAM-TS Spacer 1
NTRPF017591077.5e-2057.100376474375478UNC-6/NTR/C345C module
user protein202.000TSP_1 (PF00090): Thrombospondin type 1 domain
ADAM_spacer1 (PF05986): ADAM-TS Spacer 1
NTR (PF01759): UNC-6/NTR/C345C module
Adamtsl4

Domain structure obtained by HMM

Protein ID: XP_008825308.2 - ADAMTS-like protein 4 isoform X1
DomainsPfam IDlengthE-valueScorealifromalitoenvfromenvtoDescription
TSP_1PF00090490.0000000007625.20047714776Thrombospondin type 1 domain
TSP_1PF00090490.000337.200341359336359Thrombospondin type 1 domain
ADAM_spacer1PF059861142.7e-3297.500467579465580ADAM-TS Spacer 1
TSP_1PF00090490.000955.700654673648703Thrombospondin type 1 domain
TSP_1PF00090490.000000516.200710763708763Thrombospondin type 1 domain
TSP_1PF00090490.0000000001927.200770821767821Thrombospondin type 1 domain
Zn_ribbon_17PF17120580.0000738.700821845819847Zinc-ribbon, C4HC2 type
TSP_1PF00090490.000008412.300829869827889Thrombospondin type 1 domain
Zn_ribbon_17PF17120580.000795.400889912887916Zinc-ribbon, C4HC2 type
TSP_1PF00090490.000000008221.900897951896951Thrombospondin type 1 domain
TSP_1PF00090490.000000001424.40095810069561006Thrombospondin type 1 domain
PLACPF08686320.00000000000008838.3001014104310141044PLAC (protease and lacunin) domain
interactor100TSP_1 (PF00090): Thrombospondin type 1 domain
ADAM_spacer1 (PF05986): ADAM-TS Spacer 1
Zn_ribbon_17 (PF17120): Zinc-ribbon, C4HC2 type
PLAC (PF08686): PLAC (protease and lacunin) domain
Elavl1

Domain structure obtained by HMM

Protein ID: XP_008822366.1 - ELAV-like protein 1
KEEG Ortholog ID: K13088
DomainsPfam IDlengthE-valueScorealifromalitoenvfromenvtoDescription
RRM_1PF00076706.8e-2469.80022922292RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
RRM_1PF00076705.6e-2263.700108174108176RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
RRM_1PF00076708e-2469.600246315246316RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
oncogene200RRM_1 (PF00076): RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)

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