Find Protein-Protein Interactions (PPI) Network

Choose & Enter
Choose animal: Visualization driver:
Protein/NCBI_ID(s):
Refseq_ID(s):
KEGG_KO(s):


Level of PPIs:
or Upload text file:
Update repository

Visible interactions: Visible interactors: Size of node:

Visualization interactions

Powered by Cytoscape Web taxid = 1026970 for: protein(s) Acbd4 (from a repository: Thu Apr 12 13:44:11 2018)
Examples

Cytoscape Web will replace the contents your graph
PPI Properties:

Click on nodes
or edges

Layout Tree
Circle
Radial
Force Directed
Preset
Export graph
PDF file
SVG file
SIF file
XML file
GraphML file

Statistics and Network structure information

Statistics of PPI Value(s)
The number of interactors (fusion and proteins)4
The number (and %) of the onco-proteins0 (0.00 %)
The number (and %) of the tumor suppressors0 (0.00 %)
Total number of binary PPIs (saturation %)6 (100.00 %)
The number (and %) of affected PPIs3 (50.00 %)
PPI diameter2
PPI radius1
The average degree of PPI2.500
Assortativity coefficient0
The network average Clustering coefficient0.833
The number (and %) of a zero Clustering coefficients0 (0.00 %)
The number (and %) of a zero Betweenness Centrality2 (50.00 %)

ACTIVE INTERACTORS


List of active interactors

Interactor,
Domain structure
Type Number
of PPI (degree)
Clustering
Coefficient
Betweenness
Centrality
Domains (Pfam ID): description
Acbd4
user protein30.6671.000ACBP (PF00887): Acyl CoA binding protein
App
interactor31.0000APP_N (PF02177): Amyloid A4 N-terminal heparin-binding
APP_Cu_bd (PF12924): Copper-binding of amyloid precursor, CuBD
SDA1 (PF05285): SDA1
YtxH (PF12732): YtxH-like protein
Kunitz_BPTI (PF00014): Kunitz/Bovine pancreatic trypsin inhibitor domain
APP_E2 (PF12925): E2 domain of amyloid precursor protein
Beta-APP (PF03494): Beta-amyloid peptide (beta-APP)
APP_amyloid (PF10515): beta-amyloid precursor protein C-terminus
Vapa
interactor30.6671.000Motile_Sperm (PF00635): MSP (Major sperm protein) domain
DUF972 (PF06156): Protein of unknown function (DUF972)
UL45 (PF05473): UL45 protein, carbohydrate-binding C-type lectin-like
Vapb
interactor21.0000Motile_Sperm (PF00635): MSP (Major sperm protein) domain
ZapB (PF06005): Cell division protein ZapB
ATP-synt_G (PF04718): Mitochondrial ATP synthase g subunit

B a c k    t o    T o p ⇑