Find Protein-Protein Interactions (PPI) Network

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Visualization interactions

Powered by Cytoscape Web taxid = 1026970 for: protein(s) Acadsb (from a repository: Mon Apr 16 04:30:48 2018)
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PPI Properties:

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Statistics and Network structure information

Statistics of PPI Value(s)
The number of interactors (fusion and proteins)14
The number (and %) of the onco-proteins1 (7.14 %)
The number (and %) of the tumor suppressors0 (0.00 %)
Total number of binary PPIs (saturation %)18 (19.78 %)
The number (and %) of affected PPIs13 (72.22 %)
PPI diameter2
PPI radius1
The average degree of PPI2.286
Assortativity coefficient-0.5617
The network average Clustering coefficient0.241
The number (and %) of a zero Clustering coefficients9 (64.29 %)
The number (and %) of a zero Betweenness Centrality11 (78.57 %)

ACTIVE INTERACTORS


List of active interactors

Interactor,
Domain structure
Type Number
of PPI (degree)
Clustering
Coefficient
Betweenness
Centrality
Domains (Pfam ID): description
Acadsb
user protein130.038148.000Acyl-CoA_dh_N (PF02771): Acyl-CoA dehydrogenase, N-terminal domain
Acyl-CoA_dh_M (PF02770): Acyl-CoA dehydrogenase, middle domain
Acyl-CoA_dh_1 (PF00441): Acyl-CoA dehydrogenase, C-terminal domain
Acad8
interactor100Acyl-CoA_dh_N (PF02771): Acyl-CoA dehydrogenase, N-terminal domain
Acyl-CoA_dh_M (PF02770): Acyl-CoA dehydrogenase, middle domain
Acyl-CoA_dh_1 (PF00441): Acyl-CoA dehydrogenase, C-terminal domain
Actr1a
interactor100Actin (PF00022): Actin
Faf2
interactor40.6671.000UBA_4 (PF14555): UBA-like domain
Thioredoxin_7 (PF13899): Thioredoxin-like
DUF1682 (PF07946): Protein of unknown function (DUF1682)
UBX (PF00789): UBX domain
Kdsr
oncogene1007kD_coat (PF02495): 7kD viral coat protein
adh_short (PF00106): short chain dehydrogenase
LOC103748852
interactor40.6671.000Recep_L_domain (PF01030): Receptor L domain
Furin-like (PF00757): Furin-like cysteine rich region
GF_recep_IV (PF14843): Growth factor receptor domain IV
Prss16
interactor100Peptidase_S28 (PF05577): Serine carboxypeptidase S28
Pxdn
interactor100TILa (PF12714): TILa domain
LRR_8 (PF13855): Leucine rich repeat
I-set (PF07679): Immunoglobulin I-set domain
An_peroxidase (PF03098): Animal haem peroxidase
VWC (PF00093): von Willebrand factor type C domain
Rpgrip1
interactor100Ada3 (PF10198): Histone acetyltransferases subunit 3
DivIC (PF04977): Septum formation initiator
Peptidase_S46 (PF10459): Peptidase S46
Med9 (PF07544): RNA polymerase II transcription mediator complex subunit 9
C2-C2_1 (PF11618): First C2 domain of RPGR-interacting protein 1
C2 (PF00168): C2 domain
Rpgrip1l
interactor100TSC22 (PF01166): TSC-22/dip/bun family
CENP-F_leu_zip (PF10473): Leucine-rich repeats of kinetochore protein Cenp-F/LEK1
DivIC (PF04977): Septum formation initiator
DUF1690 (PF07956): Protein of Unknown function (DUF1690)
Mod_r (PF07200): Modifier of rudimentary (Mod(r)) protein
DUF1664 (PF07889): Protein of unknown function (DUF1664)
DUF4295 (PF14128): Domain of unknown function (DUF4295)
C2-C2_1 (PF11618): First C2 domain of RPGR-interacting protein 1
C2 (PF00168): C2 domain
DUF4497 (PF14924): Protein of unknown function (DUF4497)
Na_trans_assoc (PF06512): Sodium ion transport-associated
Tctn3
interactor100DUF1619 (PF07773): Protein of unknown function (DUF1619)
Thoc2
interactor100THOC2_N (PF16134): THO complex subunit 2 N-terminus
Thoc2 (PF11732): Transcription- and export-related complex subunit
Sec62 (PF03839): Translocation protein Sec62
Tho2 (PF11262): Transcription factor/nuclear export subunit protein 2
Usp (PF00582): Universal stress protein family
Usp19
interactor21.0000CS (PF04969): CS domain
USP19_linker (PF16602): Linker region of USP19 deubiquitinase
UCH (PF00443): Ubiquitin carboxyl-terminal hydrolase
Ythdf1
interactor21.0000DUF1421 (PF07223): Protein of unknown function (DUF1421)
YTH (PF04146): YT521-B-like domain

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