Find Protein-Protein Interactions (PPI) Network

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Visualization interactions

Powered by Cytoscape Web taxid = 1026970 for: protein(s) Ablim3 (from a repository: Thu Apr 12 11:12:48 2018)
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PPI Properties:

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Statistics and Network structure information

Statistics of PPI Value(s)
The number of interactors (fusion and proteins)5
The number (and %) of the onco-proteins0 (0.00 %)
The number (and %) of the tumor suppressors1 (20.00 %)
Total number of binary PPIs (saturation %)6 (60.00 %)
The number (and %) of affected PPIs4 (66.67 %)
PPI diameter2
PPI radius1
The average degree of PPI2.000
Assortativity coefficient-0.4082
The network average Clustering coefficient0.433
The number (and %) of a zero Clustering coefficients2 (40.00 %)
The number (and %) of a zero Betweenness Centrality4 (80.00 %)

ACTIVE INTERACTORS


List of active interactors

Interactor,
Domain structure
Type Number
of PPI (degree)
Clustering
Coefficient
Betweenness
Centrality
Domains (Pfam ID): description
Ablim3
user protein40.16710.000TNFR_c6 (PF00020): TNFR/NGFR cysteine-rich region
LIM (PF00412): LIM domain
Vps39_2 (PF10367): Vacuolar sorting protein 39 domain 2
AbLIM_anchor (PF16182): Putative adherens-junction anchoring region of AbLIM
VHP (PF02209): Villin headpiece domain
Abra
interactor21.0000DUF4632 (PF15451): Domain of unknown function (DUF4632)
Costars (PF14705): Costars
Acta1
interactor21.0000Actin (PF00022): Actin
Actc1
interactor100Actin (PF00022): Actin
Brca1
oncogene, tumor suppressor200zf-C3HC4 (PF00097): Zinc finger, C3HC4 type (RING finger)
S36_mt (PF10937): Ribosomal protein S36, mitochondrial
BRCT_assoc (PF12820): Serine-rich domain associated with BRCT
BRCT (PF00533): BRCA1 C Terminus (BRCT) domain
RTT107_BRCT_5 (PF16770): Regulator of Ty1 transposition protein 107 BRCT domain

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