Find Protein-Protein Interactions (PPI) Network

Choose & Enter
Choose animal: Visualization driver:
Protein/NCBI_ID(s):
Refseq_ID(s):
KEGG_KO(s):


Level of PPIs:
or Upload text file:
Update repository

Visible interactions: Visible interactors: Size of node:

Visualization interactions

Powered by Cytoscape Web taxid = 1026970 for: protein(s) Ablim2 (from a repository: Wed Apr 18 04:02:21 2018)
Examples

Cytoscape Web will replace the contents your graph
PPI Properties:

Click on nodes
or edges

Layout Tree
Circle
Radial
Force Directed
Preset
Export graph
PDF file
SVG file
SIF file
XML file
GraphML file

Statistics and Network structure information

Statistics of PPI Value(s)
The number of interactors (fusion and proteins)5
The number (and %) of the onco-proteins0 (0.00 %)
The number (and %) of the tumor suppressors0 (0.00 %)
Total number of binary PPIs (saturation %)6 (60.00 %)
The number (and %) of affected PPIs4 (66.67 %)
PPI diameter2
PPI radius1
The average degree of PPI2.000
Assortativity coefficient-0.4082
The network average Clustering coefficient0.433
The number (and %) of a zero Clustering coefficients2 (40.00 %)
The number (and %) of a zero Betweenness Centrality4 (80.00 %)

ACTIVE INTERACTORS


List of active interactors

Interactor,
Domain structure
Type Number
of PPI (degree)
Clustering
Coefficient
Betweenness
Centrality
Domains (Pfam ID): description
Ablim2
user protein40.16710.000LIM (PF00412): LIM domain
Med27 (PF11571): Mediator complex subunit 27
AbLIM_anchor (PF16182): Putative adherens-junction anchoring region of AbLIM
VHP (PF02209): Villin headpiece domain
Abra
interactor21.0000DUF4632 (PF15451): Domain of unknown function (DUF4632)
Costars (PF14705): Costars
Acta1
interactor21.0000Actin (PF00022): Actin
Lin7c
interactor100L27 (PF02828): L27 domain
His_Phos_2 (PF00328): Histidine phosphatase superfamily (branch 2)
PDZ (PF00595): PDZ domain (Also known as DHR or GLGF)
Srebf2
interactor200TFIIA (PF03153): Transcription factor IIA, alpha/beta subunit
HLH (PF00010): Helix-loop-helix DNA-binding domain

B a c k    t o    T o p ⇑