Find Protein-Protein Interactions (PPI) Network

Choose & Enter
Choose animal: Visualization driver:
Protein/NCBI_ID(s):
Refseq_ID(s):
KEGG_KO(s):


Level of PPIs:
or Upload text file:
Update repository

Visible interactions: Visible interactors: Size of node:

Visualization interactions

Powered by Cytoscape Web taxid = 1026970 for: protein(s) Abhd5 (from a repository: Thu Apr 19 04:00:54 2018)
Examples

Cytoscape Web will replace the contents your graph
PPI Properties:

Click on nodes
or edges

Layout Tree
Circle
Radial
Force Directed
Preset
Export graph
PDF file
SVG file
SIF file
XML file
GraphML file

Statistics and Network structure information

Statistics of PPI Value(s)
The number of interactors (fusion and proteins)9
The number (and %) of the onco-proteins1 (11.11 %)
The number (and %) of the tumor suppressors0 (0.00 %)
Total number of binary PPIs (saturation %)10 (27.78 %)
The number (and %) of affected PPIs8 (80.00 %)
PPI diameter2
PPI radius1
The average degree of PPI1.778
Assortativity coefficient0
The network average Clustering coefficient0.000
The number (and %) of a zero Clustering coefficients9 (100.00 %)
The number (and %) of a zero Betweenness Centrality8 (88.89 %)

ACTIVE INTERACTORS


List of active interactors

Interactor,
Domain structure
Type Number
of PPI (degree)
Clustering
Coefficient
Betweenness
Centrality
Domains (Pfam ID): description
Abhd5
user protein8056.000Abhydrolase_1 (PF00561): alpha/beta hydrolase fold
DUF2251 (PF10008): Uncharacterized protein conserved in bacteria (DUF2251)
DUF1071 (PF06378): Protein of unknown function (DUF1071)
Hmox2
interactor100Heme_oxygenase (PF01126): Heme oxygenase
SsgA (PF04686): Streptomyces sporulation and cell division protein, SsgA
Kdm4a
interactor200JmjN (PF02375): jmjN domain
JmjC (PF02373): JmjC domain, hydroxylase
PHD_2 (PF13831): PHD-finger
zf-HC5HC2H_2 (PF13832): PHD-zinc-finger like domain
LBR_tudor (PF09465): Lamin-B receptor of TUDOR domain
Nras
oncogene100Ras (PF00071): Ras family
Plin1
interactor200Perilipin (PF03036): Perilipin family
Trypan_PARP (PF05887): Procyclic acidic repetitive protein (PARP)
Saraf
interactor100SARAF (PF06682): SOCE-associated regulatory factor of calcium homoeostasis
Snrk
interactor100Pkinase (PF00069): Protein kinase domain
Tmem38b
interactor100TRIC (PF05197): TRIC channel
Zpr1
interactor100zf-ZPR1 (PF03367): ZPR1 zinc-finger domain

B a c k    t o    T o p ⇑