Find Protein-Protein Interactions (PPI) Network

Choose & Enter
Choose animal: Visualization driver:
Protein/NCBI_ID(s):
Refseq_ID(s):
KEGG_KO(s):


Level of PPIs:
or Upload text file:
Update repository

Visible interactions: Visible interactors: Size of node:

Visualization interactions

Powered by Cytoscape Web taxid = 1026970 for: protein(s) Abhd17a (from a repository: Tue Apr 17 17:33:45 2018)
Examples

Cytoscape Web will replace the contents your graph
PPI Properties:

Click on nodes
or edges

Layout Tree
Circle
Radial
Force Directed
Preset
Export graph
PDF file
SVG file
SIF file
XML file
GraphML file

Statistics and Network structure information

Statistics of PPI Value(s)
The number of interactors (fusion and proteins)16
The number (and %) of the onco-proteins4 (25.00 %)
The number (and %) of the tumor suppressors0 (0.00 %)
Total number of binary PPIs (saturation %)24 (20.00 %)
The number (and %) of affected PPIs15 (62.50 %)
PPI diameter2
PPI radius1
The average degree of PPI2.250
Assortativity coefficient-0.6247
The network average Clustering coefficient0.293
The number (and %) of a zero Clustering coefficients10 (62.50 %)
The number (and %) of a zero Betweenness Centrality14 (87.50 %)

ACTIVE INTERACTORS


List of active interactors

Interactor,
Domain structure
Type Number
of PPI (degree)
Clustering
Coefficient
Betweenness
Centrality
Domains (Pfam ID): description
Abhd17a
user protein150.029203.000Hydrolase_4 (PF12146): Serine aminopeptidase, S33
Peptidase_S9 (PF00326): Prolyl oligopeptidase family
UPF0227 (PF05728): Uncharacterised protein family (UPF0227)
Aplnr
oncogene1007tm_1 (PF00001): 7 transmembrane receptor (rhodopsin family)
Ehmt2
interactor200FoP_duplication (PF13865): C-terminal duplication domain of Friend of PRMT1
CDC45 (PF02724): CDC45-like protein
Ribosomal_L32p (PF01783): Ribosomal L32p protein family
Ank_2 (PF12796): Ankyrin repeats (3 copies)
Pre-SET (PF05033): Pre-SET motif
SET (PF00856): SET domain
CSRNP_N (PF16019): Cysteine/serine-rich nuclear protein N-terminus
Gpc4
interactor100Glypican (PF01153): Glypican
Hpgds
interactor200GST_N (PF02798): Glutathione S-transferase, N-terminal domain
GST_N_4 (PF17172): Glutathione S-transferase N-terminal domain
GST_C_3 (PF14497): Glutathione S-transferase, C-terminal domain
LOC103727574
interactor21.0000Atg14 (PF10186): Vacuolar sorting 38 and autophagy-related subunit 14
CENP-Q (PF13094): CENP-Q, a CENPA-CAD centromere complex subunit
DUF2046 (PF09755): Uncharacterized conserved protein H4 (DUF2046)
BRE1 (PF08647): BRE1 E3 ubiquitin ligase
FliJ (PF02050): Flagellar FliJ protein
GOLGA2L5 (PF15070): Putative golgin subfamily A member 2-like protein 5
Lpar6
interactor100MscS_TM (PF12794): Mechanosensitive ion channel inner membrane domain 1
7tm_1 (PF00001): 7 transmembrane receptor (rhodopsin family)
Mdfi
interactor200Herpes_LMP1 (PF05297): Herpesvirus latent membrane protein 1 (LMP1)
Herpes_UL56 (PF04534): Herpesvirus UL56 protein
MDFI (PF15316): MyoD family inhibitor
Plscr4
interactor100Scramblase (PF03803): Scramblase
Pnma1
oncogene100PNMA (PF14893): PNMA
Rgs20
interactor100RGS (PF00615): Regulator of G protein signaling domain
Tctex1d2
interactor100Tctex-1 (PF03645): Tctex-1 family
Tnip1
interactor31.0000Rootletin (PF15035): Ciliary rootlet component, centrosome cohesion
Pinin_SDK_memA (PF04696): pinin/SDK/memA/ protein conserved region
DUF4337 (PF14235): Domain of unknown function (DUF4337)
Filament (PF00038): Intermediate filament protein
CC2-LZ (PF16516): Leucine zipper of domain CC2 of NEMO, NF-kappa-B essential modulator
Mnd1 (PF03962): Mnd1 family
Traf1
oncogene31.0000zf-C4H2 (PF10146): Zinc finger-containing protein
TRAF_BIRC3_bd (PF16673): TNF receptor-associated factor BIRC3 binding domain
SlyX (PF04102): SlyX
Trim27
oncogene31.0000Prok-RING_4 (PF14447): Prokaryotic RING finger family 4
zf-C3HC4_4 (PF15227): zinc finger of C3HC4-type, RING
zf-AN1 (PF01428): AN1-like Zinc finger
zf-B_box (PF00643): B-box zinc finger
Lebercilin (PF15619): Ciliary protein causing Leber congenital amaurosis disease
IncA (PF04156): IncA protein
PRY (PF13765): SPRY-associated domain
SPRY (PF00622): SPRY domain
Vps28
interactor30.6671.000VPS28 (PF03997): VPS28 protein

B a c k    t o    T o p ⇑