Find Protein-Protein Interactions (PPI) Network

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Visualization interactions

Powered by Cytoscape Web taxid = 1026970 for: protein(s) Abhd16a (from a repository: Wed Apr 11 21:42:31 2018)
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PPI Properties:

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Statistics and Network structure information

Statistics of PPI Value(s)
The number of interactors (fusion and proteins)18
The number (and %) of the onco-proteins1 (5.56 %)
The number (and %) of the tumor suppressors2 (11.11 %)
Total number of binary PPIs (saturation %)21 (13.73 %)
The number (and %) of affected PPIs17 (80.95 %)
PPI diameter2
PPI radius1
The average degree of PPI2.111
Assortativity coefficient-0.7240
The network average Clustering coefficient0.149
The number (and %) of a zero Clustering coefficients14 (77.78 %)
The number (and %) of a zero Betweenness Centrality16 (88.89 %)

ACTIVE INTERACTORS


List of active interactors

Interactor,
Domain structure
Type Number
of PPI (degree)
Clustering
Coefficient
Betweenness
Centrality
Domains (Pfam ID): description
Abhd16a
user protein170.015267.000Abhydrolase_6 (PF12697): Alpha/beta hydrolase family
Abhydrolase_1 (PF00561): alpha/beta hydrolase fold
Dnajc1
interactor100DnaJ (PF00226): DnaJ domain
DUF4234 (PF14018): Domain of unknown function (DUF4234)
Myb_DNA-binding (PF00249): Myb-like DNA-binding domain
Dtx2
oncogene100WWE (PF02825): WWE domain
zf-rbx1 (PF12678): RING-H2 zinc finger domain
zf-UDP (PF14569): Zinc-binding RING-finger
Hm13
interactor100DUF4345 (PF14248): Domain of unknown function (DUF4345)
Peptidase_A22B (PF04258): Signal peptide peptidase
DUF788 (PF05620): Protein of unknown function (DUF788)
LOC103751065
interactor100CD225 (PF04505): Interferon-induced transmembrane protein
Mcoln3
interactor100PKD_channel (PF08016): Polycystin cation channel
Mlh1
oncogene, tumor suppressor100HATPase_c_3 (PF13589): Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
DNA_mis_repair (PF01119): DNA mismatch repair protein, C-terminal domain
Mlh1_C (PF16413): DNA mismatch repair protein Mlh1 C-terminus
Nxf1
interactor40.6671.000Tap-RNA_bind (PF09162): Tap, RNA-binding
LRR_8 (PF13855): Leucine rich repeat
NTF2 (PF02136): Nuclear transport factor 2 (NTF2) domain
TAP_C (PF03943): TAP C-terminal domain
Retreg3
interactor21.0000Reticulon (PF02453): Reticulon
Rictor
interactor100RICTOR_N (PF14664): Rapamycin-insensitive companion of mTOR, N-term
RICTOR_M (PF14666): Rapamycin-insensitive companion of mTOR, middle domain
RasGEF_N_2 (PF14663): Rapamycin-insensitive companion of mTOR RasGEF_N domain
RICTOR_V (PF14668): Rapamycin-insensitive companion of mTOR, domain 5
RICTOR_phospho (PF14665): Rapamycin-insensitive companion of mTOR, phosphorylation-site
Rnf5
interactor200zf-C3HC4_3 (PF13920): Zinc finger, C3HC4 type (RING finger)
Rtf2 (PF04641): Rtf2 RING-finger
Safb
tumor suppressor100SAP (PF02037): SAP domain
Spt5_N (PF11942): Spt5 transcription elongation factor, acidic N-terminal
DUF4228 (PF14009): Domain of unknown function (DUF4228)
RRM_1 (PF00076): RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
Scnn1d
interactor100ASC (PF00858): Amiloride-sensitive sodium channel
Spag7
interactor100DUF1451 (PF07295): Zinc-ribbon containing domain
R3H (PF01424): R3H domain
Tbc1d9
interactor100GRAM (PF02893): GRAM domain
RabGAP-TBC (PF00566): Rab-GTPase-TBC domain
EF-hand_1 (PF00036): EF hand
Tmem147
interactor100DUF2053 (PF09767): Predicted membrane protein (DUF2053)
Tmem222
interactor21.0000DUF778 (PF05608): Protein of unknown function (DUF778)
Upf1
interactor100UPF1_Zn_bind (PF09416): RNA helicase (UPF2 interacting domain)
AAA_11 (PF13086): AAA domain
AAA_12 (PF13087): AAA domain

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