Find Protein-Protein Interactions (PPI) Network

Choose & Enter
Choose animal: Visualization driver:
Protein/NCBI_ID(s):
Refseq_ID(s):
KEGG_KO(s):


Level of PPIs:
or Upload text file:
Update repository

Visible interactions: Visible interactors: Size of node:

Visualization interactions

Powered by Cytoscape Web taxid = 1026970 for: protein(s) Abhd15 (from a repository: Sat Apr 14 14:00:18 2018)
Examples

Cytoscape Web will replace the contents your graph
PPI Properties:

Click on nodes
or edges

Layout Tree
Circle
Radial
Force Directed
Preset
Export graph
PDF file
SVG file
SIF file
XML file
GraphML file

Statistics and Network structure information

Statistics of PPI Value(s)
The number of interactors (fusion and proteins)8
The number (and %) of the onco-proteins1 (12.50 %)
The number (and %) of the tumor suppressors2 (25.00 %)
Total number of binary PPIs (saturation %)18 (64.29 %)
The number (and %) of affected PPIs7 (38.89 %)
PPI diameter2
PPI radius1
The average degree of PPI4.250
Assortativity coefficient0.0059
The network average Clustering coefficient0.780
The number (and %) of a zero Clustering coefficients0 (0.00 %)
The number (and %) of a zero Betweenness Centrality2 (25.00 %)

ACTIVE INTERACTORS


List of active interactors

Interactor,
Domain structure
Type Number
of PPI (degree)
Clustering
Coefficient
Betweenness
Centrality
Domains (Pfam ID): description
Abhd15
user protein70.47613.000Hydrolase_4 (PF12146): Serine aminopeptidase, S33
Bag5
interactor21.0000BAG (PF02179): BAG domain
RRF (PF01765): Ribosome recycling factor
Dnajb4
tumor suppressor40.8330.667DnaJ (PF00226): DnaJ domain
DnaJ_C (PF01556): DnaJ C terminal domain
Hspa2
heat shock40.8330.667HSP70 (PF00012): Hsp70 protein
Hspa6
heat shock31.0000HSP70 (PF00012): Hsp70 protein
Hspa8
heat shock, oncogene60.6005.000HSP70 (PF00012): Hsp70 protein
Stip1
interactor40.8330.667TPR_11 (PF13414): TPR repeat
TPR_2 (PF07719): Tetratricopeptide repeat
TPR_17 (PF13431): Tetratricopeptide repeat
TPR_1 (PF00515): Tetratricopeptide repeat
Wtap (PF17098): WTAP/Mum2p family
DREPP (PF05558): DREPP plasma membrane polypeptide
TPR_12 (PF13424): Tetratricopeptide repeat
Stub1
tumor suppressor50.6672.000ANAPC3 (PF12895): Anaphase-promoting complex, cyclosome, subunit 3
TPR_14 (PF13428): Tetratricopeptide repeat
TPR_20 (PF14561): Tetratricopeptide repeat
U-box (PF04564): U-box domain

B a c k    t o    T o p ⇑