Find Protein-Protein Interactions (PPI) Network

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Visualization interactions

Powered by Cytoscape Web taxid = 1026970 for: protein(s) Abcf3 (from a repository: Fri Apr 13 19:07:54 2018)
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PPI Properties:

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Statistics and Network structure information

Statistics of PPI Value(s)
The number of interactors (fusion and proteins)6
The number (and %) of the onco-proteins4 (66.67 %)
The number (and %) of the tumor suppressors0 (0.00 %)
Total number of binary PPIs (saturation %)9 (60.00 %)
The number (and %) of affected PPIs5 (55.56 %)
PPI diameter2
PPI radius1
The average degree of PPI2.000
Assortativity coefficient-0.4472
The network average Clustering coefficient0.350
The number (and %) of a zero Clustering coefficients3 (50.00 %)
The number (and %) of a zero Betweenness Centrality5 (83.33 %)

ACTIVE INTERACTORS


List of active interactors

Interactor,
Domain structure
Type Number
of PPI (degree)
Clustering
Coefficient
Betweenness
Centrality
Domains (Pfam ID): description
Abcf3
user protein50.10018.000PLRV_ORF5 (PF01690): Potato leaf roll virus readthrough protein
ABC_tran (PF00005): ABC transporter
AAA_21 (PF13304): AAA domain, putative AbiEii toxin, Type IV TA system
ABC_tran_Xtn (PF12848): ABC transporter
SMC_N (PF02463): RecF/RecN/SMC N terminal domain
Foxl1
oncogene100Forkhead (PF00250): Forkhead domain
Ntrk1
oncogene31.0000LRR_8 (PF13855): Leucine rich repeat
TPKR_C2 (PF16920): Tyrosine-protein kinase receptor C2 Ig-like domain
Ig_3 (PF13927): Immunoglobulin domain
I-set (PF07679): Immunoglobulin I-set domain
Pkinase_Tyr (PF07714): Protein tyrosine kinase
Nxf1
interactor200Tap-RNA_bind (PF09162): Tap, RNA-binding
LRR_8 (PF13855): Leucine rich repeat
NTF2 (PF02136): Nuclear transport factor 2 (NTF2) domain
TAP_C (PF03943): TAP C-terminal domain
Ppp2r1a
oncogene21.0000HEAT_2 (PF13646): HEAT repeats
HEAT_PBS (PF03130): PBS lyase HEAT-like repeat
HEAT (PF02985): HEAT repeat
TAF6_C (PF07571): TAF6 C-terminal HEAT repeat domain
Trim27
oncogene200Prok-RING_4 (PF14447): Prokaryotic RING finger family 4
zf-C3HC4_4 (PF15227): zinc finger of C3HC4-type, RING
zf-AN1 (PF01428): AN1-like Zinc finger
zf-B_box (PF00643): B-box zinc finger
Lebercilin (PF15619): Ciliary protein causing Leber congenital amaurosis disease
IncA (PF04156): IncA protein
PRY (PF13765): SPRY-associated domain
SPRY (PF00622): SPRY domain

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