Find Protein-Protein Interactions (PPI) Network

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Visualization interactions

Powered by Cytoscape Web taxid = 1026970 for: protein(s) Abcd4 (from a repository: Thu Apr 19 22:19:01 2018)
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Statistics and Network structure information

Statistics of PPI Value(s)
The number of interactors (fusion and proteins)11
The number (and %) of the onco-proteins2 (18.18 %)
The number (and %) of the tumor suppressors1 (9.09 %)
Total number of binary PPIs (saturation %)15 (27.27 %)
The number (and %) of affected PPIs10 (66.67 %)
PPI diameter2
PPI radius1
The average degree of PPI1.818
Assortativity coefficient0
The network average Clustering coefficient0.000
The number (and %) of a zero Clustering coefficients11 (100.00 %)
The number (and %) of a zero Betweenness Centrality10 (90.91 %)

ACTIVE INTERACTORS


List of active interactors

Interactor,
Domain structure
Type Number
of PPI (degree)
Clustering
Coefficient
Betweenness
Centrality
Domains (Pfam ID): description
Abcd4
user protein10090.000ABC_membrane_2 (PF06472): ABC transporter transmembrane region 2
ABC_tran (PF00005): ABC transporter
PhoH (PF02562): PhoH-like protein
AAA_22 (PF13401): AAA domain
Atp2b2
interactor100Cation_ATPase_N (PF00690): Cation transporter/ATPase, N-terminus
E1-E2_ATPase (PF00122): E1-E2 ATPase
DUF106 (PF01956): Integral membrane protein DUF106
Cation_ATPase (PF13246): Cation transport ATPase (P-type)
Hydrolase_3 (PF08282): haloacid dehalogenase-like hydrolase
Cation_ATPase_C (PF00689): Cation transporting ATPase, C-terminus
ATP_Ca_trans_C (PF12424): Plasma membrane calcium transporter ATPase C terminal
Fam234b
interactor100VCBS (PF13517): Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella
FG-GAP (PF01839): FG-GAP repeat
PQQ_2 (PF13360): PQQ-like domain
Fshr
interactor100LRRNT (PF01462): Leucine rich repeat N-terminal domain
LRR_5 (PF13306): Leucine rich repeats (6 copies)
LRR_8 (PF13855): Leucine rich repeat
LRR_4 (PF12799): Leucine Rich repeats (2 copies)
GnHR_trans (PF12369): Gonadotropin hormone receptor transmembrane region
7tm_1 (PF00001): 7 transmembrane receptor (rhodopsin family)
Hspb2
heat shock200Crystallin (PF00525): Alpha crystallin A chain, N terminal
HSP20 (PF00011): Hsp20/alpha crystallin family
Kcna5
interactor200BTB_2 (PF02214): BTB/POZ domain
Ion_trans (PF00520): Ion transport protein
LOC103736087
interactor200Cadherin_2 (PF08266): Cadherin-like
Cadherin_3 (PF16184): Cadherin-like
Cadherin (PF00028): Cadherin domain
Cadherin_C_2 (PF16492): Cadherin cytoplasmic C-terminal
Pdgfrb
oncogene200ig (PF00047): Immunoglobulin domain
Ig_3 (PF13927): Immunoglobulin domain
V-set (PF07686): Immunoglobulin V-set domain
I-set (PF07679): Immunoglobulin I-set domain
C1-set (PF07654): Immunoglobulin C1-set domain
Pkinase_Tyr (PF07714): Protein tyrosine kinase
Pea15
tumor suppressor100DED (PF01335): Death effector domain
Slc17a2
interactor100MFS_1 (PF07690): Major Facilitator Superfamily
Xrcc6
oncogene200Ku_N (PF03731): Ku70/Ku80 N-terminal alpha/beta domain
Ku (PF02735): Ku70/Ku80 beta-barrel domain
Ku_C (PF03730): Ku70/Ku80 C-terminal arm
SAP (PF02037): SAP domain

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