Find Protein-Protein Interactions (PPI) Network

Choose & Enter
Choose animal: Visualization driver:
Protein/NCBI_ID(s):
Refseq_ID(s):
KEGG_KO(s):


Level of PPIs:
or Upload text file:
Update repository

Visible interactions: Visible interactors: Size of node:

Visualization interactions

Powered by Cytoscape Web taxid = 1026970 for: protein(s) Abcc3 (from a repository: Wed Apr 11 22:03:35 2018)
Examples

Cytoscape Web will replace the contents your graph
PPI Properties:

Click on nodes
or edges

Layout Tree
Circle
Radial
Force Directed
Preset
Export graph
PDF file
SVG file
SIF file
XML file
GraphML file

Statistics and Network structure information

Statistics of PPI Value(s)
The number of interactors (fusion and proteins)10
The number (and %) of the onco-proteins0 (0.00 %)
The number (and %) of the tumor suppressors1 (10.00 %)
Total number of binary PPIs (saturation %)16 (35.56 %)
The number (and %) of affected PPIs9 (56.25 %)
PPI diameter2
PPI radius1
The average degree of PPI3.000
Assortativity coefficient-0.3774
The network average Clustering coefficient0.783
The number (and %) of a zero Clustering coefficients1 (10.00 %)
The number (and %) of a zero Betweenness Centrality8 (80.00 %)

ACTIVE INTERACTORS


List of active interactors

Interactor,
Domain structure
Type Number
of PPI (degree)
Clustering
Coefficient
Betweenness
Centrality
Domains (Pfam ID): description
Abcc3
user protein90.16759.000DUF805 (PF05656): Protein of unknown function (DUF805)
IBV_3A (PF03617): IBV 3A protein
ABC_membrane (PF00664): ABC transporter transmembrane region
ABC_tran (PF00005): ABC transporter
SMC_N (PF02463): RecF/RecN/SMC N terminal domain
Atp9a
interactor100PhoLip_ATPase_N (PF16209): Phospholipid-translocating ATPase N-terminal
E1-E2_ATPase (PF00122): E1-E2 ATPase
Hydrolase (PF00702): haloacid dehalogenase-like hydrolase
Hydrolase_3 (PF08282): haloacid dehalogenase-like hydrolase
PhoLip_ATPase_C (PF16212): Phospholipid-translocating P-type ATPase C-terminal
Canx
interactor30.6671.000TRAP_alpha (PF03896): Translocon-associated protein (TRAP), alpha subunit
Calreticulin (PF00262): Calreticulin family
DUF1510 (PF07423): Protein of unknown function (DUF1510)
Eef2
interactor21.0000GTP_EFTU (PF00009): Elongation factor Tu GTP binding domain
GTP_EFTU_D2 (PF03144): Elongation factor Tu domain 2
EFG_II (PF14492): Elongation Factor G, domain II
EFG_IV (PF03764): Elongation factor G, domain IV
EFG_C (PF00679): Elongation factor G C-terminus
Idh3a
interactor21.0000Iso_dh (PF00180): Isocitrate/isopropylmalate dehydrogenase
Mlh1
oncogene, tumor suppressor21.0000HATPase_c_3 (PF13589): Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
DNA_mis_repair (PF01119): DNA mismatch repair protein, C-terminal domain
Mlh1_C (PF16413): DNA mismatch repair protein Mlh1 C-terminus
Vcp
interactor31.0000CDC48_N (PF02359): Cell division protein 48 (CDC48), N-terminal domain
CDC48_2 (PF02933): Cell division protein 48 (CDC48), domain 2
AAA (PF00004): ATPase family associated with various cellular activities (AAA)
TniB (PF05621): Bacterial TniB protein
Vps4_C (PF09336): Vps4 C terminal oligomerisation domain
DUF3944 (PF13099): Domain of unknown function (DUF3944)
Vdac1
interactor31.0000Porin_3 (PF01459): Eukaryotic porin
Vdac2
interactor31.0000Porin_3 (PF01459): Eukaryotic porin
Vdac3
interactor31.0000Porin_3 (PF01459): Eukaryotic porin

B a c k    t o    T o p ⇑