Find Protein-Protein Interactions (PPI) Network

Choose & Enter
Choose animal: Visualization driver:
Protein/NCBI_ID(s):
Refseq_ID(s):
KEGG_KO(s):


Level of PPIs:
or Upload text file:
Update repository

Visible interactions: Visible interactors: Size of node:

Visualization interactions

Powered by Cytoscape Web taxid = 1026970 for: protein(s) Abcb9 (from a repository: Wed Apr 11 17:33:36 2018)
Examples

Cytoscape Web will replace the contents your graph
PPI Properties:

Click on nodes
or edges

Layout Tree
Circle
Radial
Force Directed
Preset
Export graph
PDF file
SVG file
SIF file
XML file
GraphML file

Statistics and Network structure information

Statistics of PPI Value(s)
The number of interactors (fusion and proteins)10
The number (and %) of the onco-proteins1 (10.00 %)
The number (and %) of the tumor suppressors0 (0.00 %)
Total number of binary PPIs (saturation %)11 (24.44 %)
The number (and %) of affected PPIs9 (81.82 %)
PPI diameter2
PPI radius1
The average degree of PPI1.800
Assortativity coefficient0
The network average Clustering coefficient0.000
The number (and %) of a zero Clustering coefficients10 (100.00 %)
The number (and %) of a zero Betweenness Centrality9 (90.00 %)

ACTIVE INTERACTORS


List of active interactors

Interactor,
Domain structure
Type Number
of PPI (degree)
Clustering
Coefficient
Betweenness
Centrality
Domains (Pfam ID): description
Abcb9
user protein9072.000DUF4131 (PF13567): Domain of unknown function (DUF4131)
FA_desaturase (PF00487): Fatty acid desaturase
ABC_membrane (PF00664): ABC transporter transmembrane region
DUF4191 (PF13829): Domain of unknown function (DUF4191)
ABC_tran (PF00005): ABC transporter
SMC_N (PF02463): RecF/RecN/SMC N terminal domain
Atp2b2
interactor100Cation_ATPase_N (PF00690): Cation transporter/ATPase, N-terminus
E1-E2_ATPase (PF00122): E1-E2 ATPase
DUF106 (PF01956): Integral membrane protein DUF106
Cation_ATPase (PF13246): Cation transport ATPase (P-type)
Hydrolase_3 (PF08282): haloacid dehalogenase-like hydrolase
Cation_ATPase_C (PF00689): Cation transporting ATPase, C-terminus
ATP_Ca_trans_C (PF12424): Plasma membrane calcium transporter ATPase C terminal
C3ar1
oncogene1007tm_1 (PF00001): 7 transmembrane receptor (rhodopsin family)
7TM_GPCR_Srw (PF10324): Serpentine type 7TM GPCR chemoreceptor Srw
DUF4199 (PF13858): Protein of unknown function (DUF4199)
Cnga3
interactor100Ion_trans (PF00520): Ion transport protein
cNMP_binding (PF00027): Cyclic nucleotide-binding domain
CLZ (PF16526): C-terminal leucine zipper domain of cyclic nucleotide-gated channels
LOC103727156
interactor100DEAD (PF00270): DEAD/DEAH box helicase
Helicase_C (PF00271): Helicase conserved C-terminal domain
LOC103736087
interactor200Cadherin_2 (PF08266): Cadherin-like
Cadherin_3 (PF16184): Cadherin-like
Cadherin (PF00028): Cadherin domain
Cadherin_C_2 (PF16492): Cadherin cytoplasmic C-terminal
LOC103736106
interactor200Cadherin_2 (PF08266): Cadherin-like
Cadherin_3 (PF16184): Cadherin-like
Cadherin (PF00028): Cadherin domain
Cadherin_C_2 (PF16492): Cadherin cytoplasmic C-terminal
Lrrc8b
interactor100Pannexin_like (PF12534): Pannexin-like TM region of LRRC8
LRR_4 (PF12799): Leucine Rich repeats (2 copies)
LRR_8 (PF13855): Leucine rich repeat
Slc17a2
interactor100MFS_1 (PF07690): Major Facilitator Superfamily
Tmem9b
interactor100Tmemb_9 (PF05434): TMEM9

B a c k    t o    T o p ⇑