Find Protein-Protein Interactions (PPI) Network

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Visualization interactions

Powered by Cytoscape Web taxid = 1026970 for: protein(s) Abca13 (from a repository: Fri Apr 13 06:01:33 2018)
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PPI Properties:

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Statistics and Network structure information

Statistics of PPI Value(s)
The number of interactors (fusion and proteins)4
The number (and %) of the onco-proteins0 (0.00 %)
The number (and %) of the tumor suppressors0 (0.00 %)
Total number of binary PPIs (saturation %)4 (66.67 %)
The number (and %) of affected PPIs3 (75.00 %)
PPI diameter2
PPI radius1
The average degree of PPI1.500
Assortativity coefficient0
The network average Clustering coefficient0.000
The number (and %) of a zero Clustering coefficients4 (100.00 %)
The number (and %) of a zero Betweenness Centrality3 (75.00 %)

ACTIVE INTERACTORS


List of active interactors

Interactor,
Domain structure
Type Number
of PPI (degree)
Clustering
Coefficient
Betweenness
Centrality
Domains (Pfam ID): description
Abca13
user protein306.000Muted (PF14942): Organelle biogenesis, Muted-like protein
DUF1798 (PF08807): Bacterial domain of unknown function (DUF1798)
Syntaxin-6_N (PF09177): Syntaxin 6, N-terminal
DUF4888 (PF16229): Domain of unknown function (DUF4888)
DUF4351 (PF14261): Domain of unknown function (DUF4351)
Borrelia_orfD (PF02999): Borrelia orf-D family
PCI (PF01399): PCI domain
ABC2_membrane_3 (PF12698): ABC-2 family transporter protein
ABC_tran (PF00005): ABC transporter
AAA_21 (PF13304): AAA domain, putative AbiEii toxin, Type IV TA system
DUF4162 (PF13732): Domain of unknown function (DUF4162)
Apoa2
interactor100ApoA-II (PF04711): Apolipoprotein A-II (ApoA-II)
Cul3
interactor200Cullin (PF00888): Cullin family
WAC_Acf1_DNA_bd (PF10537): ATP-utilising chromatin assembly and remodelling N-terminal
Cullin_Nedd8 (PF10557): Cullin protein neddylation domain
Hagh
interactor100Lactamase_B (PF00753): Metallo-beta-lactamase superfamily
Lactamase_B_2 (PF12706): Beta-lactamase superfamily domain
HAGH_C (PF16123): Hydroxyacylglutathione hydrolase C-terminus

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