Find Protein-Protein Interactions (PPI) Network

Choose & Enter
Choose animal: Visualization driver:
Protein/NCBI_ID(s):
Refseq_ID(s):
KEGG_KO(s):


Level of PPIs:
or Upload text file:
Update repository

Visible interactions: Visible interactors: Size of node:

Visualization interactions

Powered by Cytoscape Web taxid = 1026970 for: protein(s) A4galt (from a repository: Fri Apr 13 06:18:38 2018)
Examples

Cytoscape Web will replace the contents your graph
PPI Properties:

Click on nodes
or edges

Layout Tree
Circle
Radial
Force Directed
Preset
Export graph
PDF file
SVG file
SIF file
XML file
GraphML file

Statistics and Network structure information

Statistics of PPI Value(s)
The number of interactors (fusion and proteins)6
The number (and %) of the onco-proteins0 (0.00 %)
The number (and %) of the tumor suppressors0 (0.00 %)
Total number of binary PPIs (saturation %)5 (33.33 %)
The number (and %) of affected PPIs5 (100.00 %)
PPI diameter2
PPI radius1
The average degree of PPI1.667
Assortativity coefficient0
The network average Clustering coefficient0.000
The number (and %) of a zero Clustering coefficients6 (100.00 %)
The number (and %) of a zero Betweenness Centrality5 (83.33 %)

ACTIVE INTERACTORS


List of active interactors

Interactor,
Domain structure
Type Number
of PPI (degree)
Clustering
Coefficient
Betweenness
Centrality
Domains (Pfam ID): description
A4galt
user protein5020.000Gly_transf_sug (PF04488): Glycosyltransferase sugar-binding region containing DXD motif
Gb3_synth (PF04572): Alpha 1,4-glycosyltransferase conserved region
Abhd17b
interactor100Hydrolase_4 (PF12146): Serine aminopeptidase, S33
Peptidase_S9 (PF00326): Prolyl oligopeptidase family
Canx
interactor100TRAP_alpha (PF03896): Translocon-associated protein (TRAP), alpha subunit
Calreticulin (PF00262): Calreticulin family
DUF1510 (PF07423): Protein of unknown function (DUF1510)
Fcgrt
interactor100MHC_I (PF00129): Class I Histocompatibility antigen, domains alpha 1 and 2
C1-set (PF07654): Immunoglobulin C1-set domain
Ick
interactor100Pkinase (PF00069): Protein kinase domain
Ptgfrn
interactor100V-set (PF07686): Immunoglobulin V-set domain
Ig_3 (PF13927): Immunoglobulin domain
Ig_2 (PF13895): Immunoglobulin domain

B a c k    t o    T o p ⇑