Find Protein-Protein Interactions (PPI) Network

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Visualization interactions

Powered by Cytoscape Web taxid = 1026970 for: protein(s) A1cf (from a repository: Fri Apr 13 02:22:59 2018)
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PPI Properties:

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Statistics and Network structure information

Statistics of PPI Value(s)
The number of interactors (fusion and proteins)9
The number (and %) of the onco-proteins2 (22.22 %)
The number (and %) of the tumor suppressors0 (0.00 %)
Total number of binary PPIs (saturation %)12 (33.33 %)
The number (and %) of affected PPIs8 (66.67 %)
PPI diameter2
PPI radius1
The average degree of PPI2.000
Assortativity coefficient-0.5000
The network average Clustering coefficient0.226
The number (and %) of a zero Clustering coefficients6 (66.67 %)
The number (and %) of a zero Betweenness Centrality8 (88.89 %)

ACTIVE INTERACTORS


List of active interactors

Interactor,
Domain structure
Type Number
of PPI (degree)
Clustering
Coefficient
Betweenness
Centrality
Domains (Pfam ID): description
A1cf
user protein80.03654.000RRM_1 (PF00076): RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
DND1_DSRM (PF14709): double strand RNA binding domain from DEAD END PROTEIN 1
Apobec1
interactor31.0000APOBEC_N (PF08210): APOBEC-like N-terminal domain
APOBEC_C (PF05240): APOBEC-like C-terminal domain
Fhl3
interactor200LIM (PF00412): LIM domain
Med27 (PF11571): Mediator complex subunit 27
Khsrp
interactor100KH_1 (PF00013): KH domain
Herpes_capsid (PF06112): Gammaherpesvirus capsid protein
DUF1897 (PF09005): Domain of unknown function (DUF1897)
Mito_fiss_reg (PF05308): Mitochondrial fission regulator
Psmg3
interactor100PAC3 (PF10178): Proteasome assembly chaperone 3
Rel
oncogene100RHD_DNA_bind (PF00554): Rel homology DNA-binding domain
RHD_dimer (PF16179): Rel homology dimerisation domain
Syncrip
interactor21.0000RRM_1 (PF00076): RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
Limkain-b1 (PF11608): Limkain b1
Tnpo2
interactor100Arm (PF00514): Armadillo/beta-catenin-like repeat
IBN_N (PF03810): Importin-beta N-terminal domain
HEAT_2 (PF13646): HEAT repeats
Vac14_Fab1_bd (PF12755): Vacuolar 14 Fab1-binding region
MMS19_C (PF12460): RNAPII transcription regulator C-terminal
HEAT_EZ (PF13513): HEAT-like repeat
DUF2573 (PF10835): Protein of unknown function (DUF2573)
Dopey_N (PF04118): Dopey, N-terminal
Cnd1 (PF12717): non-SMC mitotic condensation complex subunit 1
CAS_CSE1 (PF03378): CAS/CSE protein, C-terminus
Traf1
oncogene200zf-C4H2 (PF10146): Zinc finger-containing protein
TRAF_BIRC3_bd (PF16673): TNF receptor-associated factor BIRC3 binding domain
SlyX (PF04102): SlyX

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